At present is the period of information communication technology in the E-commerce. E-Business is the totally accomplishment of this. In era of E-Business, the E-Transaction takes place over the communication network as well as Internet. At some stage in various phases of an electronic communication transaction, the information and data such as invention measurement, design, pattern, order details, online payment information as well as delivery information travels over communication network and internet. So now a days, thieves and hackers are finding the opportunities to take information related online payment transaction. For the reason that, the need for security in every online payment transactions are become mandatory for everyone and every organization to make safe transaction. To overcome this problem, two most popular E-commerce transactions secure protocols like Secure Socket Layer (SSL) and Secure Electronic Transaction (SET) are used to fulfill the security job for E-commerce transaction